Additional Campus Affiliations
Assistant Professor, Electrical and Computer Engineering
Assistant Professor, Coordinated Science Lab
Affiliate, Carl R. Woese Institute for Genomic Biology
Recent Publications
Greenberg, G., & Shomorony, I. (2024). The Metagenomic Binning Problem: Clustering Markov Sequences. IEEE Transactions on Molecular, Biological, and Multi-Scale Communications, 10(1), 32-42. https://doi.org/10.1109/TMBMC.2023.3336254
Mazooji, K., & Shomorony, I. (2024). An Instance-Based Approach to the Trace Reconstruction Problem. In 2024 58th Annual Conference on Information Sciences and Systems, CISS 2024 (2024 58th Annual Conference on Information Sciences and Systems, CISS 2024). Institute of Electrical and Electronics Engineers Inc.. https://doi.org/10.1109/CISS59072.2024.10480213
Mazooji, K., & Shomorony, I. (2024). Fast multiple sequence alignment via multi-armed bandits. Bioinformatics, 40, i328-i336. https://doi.org/10.1093/bioinformatics/btae225
Mazooji, K., & Shomorony, I. (2024). Substring Density Estimation from Traces. IEEE Transactions on Information Theory, 70(8), 5782-5798. https://doi.org/10.1109/TIT.2024.3418377
Nassirpour, S., Shomorony, I., & Vahid, A. (2024). DNA Merge-Sort: A Family of Nested Varshamov-Tenengolts Reassembly Codes for Out-of-Order Media. IEEE Transactions on Communications, 72(3), 1303-1317. https://doi.org/10.1109/TCOMM.2023.3335409